Mercurial > repos > nikos > ucsc_tools
comparison tool_dependencies.xml @ 20:3dede45026d7 draft
Uploaded
| author | nikos |
|---|---|
| date | Tue, 09 Sep 2014 10:32:57 -0400 |
| parents | |
| children |
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| 19:fc7f090fd00b | 20:3dede45026d7 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="bigWigSummary" version="1.0"> | |
| 4 <install version="1.0"> | |
| 5 <actions> | |
| 6 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigSummary</action> | |
| 7 <action type="move_directory_files"> | |
| 8 <source_directory>.</source_directory> | |
| 9 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 10 </action> | |
| 11 <action type="chmod"><file mode="755">$INSTALL_DIR/bigWigSummary</file></action> | |
| 12 <action type="set_environment"> | |
| 13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
| 14 </action> | |
| 15 </actions> | |
| 16 </install> | |
| 17 <readme> | |
| 18 </readme> | |
| 19 </package> | |
| 20 <package name="bedClip" version="1.0"> | |
| 21 <install version="1.0"> | |
| 22 <actions> | |
| 23 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bedClip</action> | |
| 24 <action type="move_directory_files"> | |
| 25 <source_directory>.</source_directory> | |
| 26 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 27 </action> | |
| 28 <action type="chmod"><file mode="755">$INSTALL_DIR/bedClip</file></action> | |
| 29 <action type="set_environment"> | |
| 30 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
| 31 </action> | |
| 32 </actions> | |
| 33 </install> | |
| 34 <readme> | |
| 35 </readme> | |
| 36 </package> | |
| 37 <package name="bedExtendRanges" version="1.0"> | |
| 38 <install version="1.0"> | |
| 39 <actions> | |
| 40 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bedExtendRanges</action> | |
| 41 <action type="move_directory_files"> | |
| 42 <source_directory>.</source_directory> | |
| 43 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 44 </action> | |
| 45 <action type="chmod"><file mode="755">$INSTALL_DIR/bedExtendRanges</file></action> | |
| 46 <action type="set_environment"> | |
| 47 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
| 48 </action> | |
| 49 </actions> | |
| 50 </install> | |
| 51 <readme> | |
| 52 </readme> | |
| 53 </package> | |
| 54 <package name="faCount" version="1.0"> | |
| 55 <install version="1.0"> | |
| 56 <actions> | |
| 57 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/faCount</action> | |
| 58 <action type="move_directory_files"> | |
| 59 <source_directory>.</source_directory> | |
| 60 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 61 </action> | |
| 62 <action type="chmod"><file mode="755">$INSTALL_DIR/faCount</file></action> | |
| 63 <action type="set_environment"> | |
| 64 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
| 65 </action> | |
| 66 </actions> | |
| 67 </install> | |
| 68 <readme> | |
| 69 </readme> | |
| 70 </package> | |
| 71 <package name="fetchChromSizes" version="1.0"> | |
| 72 <install version="1.0"> | |
| 73 <actions> | |
| 74 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/fetchChromSizes</action> | |
| 75 <action type="move_directory_files"> | |
| 76 <source_directory>.</source_directory> | |
| 77 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 78 </action> | |
| 79 <action type="chmod"><file mode="755">$INSTALL_DIR/fetchChromSizes</file></action> | |
| 80 <action type="set_environment"> | |
| 81 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
| 82 </action> | |
| 83 </actions> | |
| 84 </install> | |
| 85 <readme> | |
| 86 </readme> | |
| 87 </package> | |
| 88 </tool_dependency> |