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20
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="bigWigSummary" version="1.0">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigSummary</action>
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7 <action type="move_directory_files">
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8 <source_directory>.</source_directory>
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9 <destination_directory>$INSTALL_DIR</destination_directory>
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10 </action>
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11 <action type="chmod"><file mode="755">$INSTALL_DIR/bigWigSummary</file></action>
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12 <action type="set_environment">
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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14 </action>
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15 </actions>
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16 </install>
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17 <readme>
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18 </readme>
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19 </package>
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20 <package name="bedClip" version="1.0">
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21 <install version="1.0">
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22 <actions>
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23 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bedClip</action>
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24 <action type="move_directory_files">
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25 <source_directory>.</source_directory>
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26 <destination_directory>$INSTALL_DIR</destination_directory>
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27 </action>
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28 <action type="chmod"><file mode="755">$INSTALL_DIR/bedClip</file></action>
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29 <action type="set_environment">
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30 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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31 </action>
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32 </actions>
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33 </install>
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34 <readme>
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35 </readme>
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36 </package>
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37 <package name="bedExtendRanges" version="1.0">
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38 <install version="1.0">
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39 <actions>
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40 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bedExtendRanges</action>
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41 <action type="move_directory_files">
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42 <source_directory>.</source_directory>
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43 <destination_directory>$INSTALL_DIR</destination_directory>
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44 </action>
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45 <action type="chmod"><file mode="755">$INSTALL_DIR/bedExtendRanges</file></action>
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46 <action type="set_environment">
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47 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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48 </action>
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49 </actions>
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50 </install>
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51 <readme>
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52 </readme>
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53 </package>
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54 <package name="faCount" version="1.0">
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55 <install version="1.0">
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56 <actions>
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57 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/faCount</action>
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58 <action type="move_directory_files">
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59 <source_directory>.</source_directory>
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60 <destination_directory>$INSTALL_DIR</destination_directory>
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61 </action>
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62 <action type="chmod"><file mode="755">$INSTALL_DIR/faCount</file></action>
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63 <action type="set_environment">
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64 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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65 </action>
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66 </actions>
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67 </install>
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68 <readme>
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69 </readme>
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70 </package>
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71 <package name="fetchChromSizes" version="1.0">
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72 <install version="1.0">
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73 <actions>
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74 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/fetchChromSizes</action>
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75 <action type="move_directory_files">
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76 <source_directory>.</source_directory>
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77 <destination_directory>$INSTALL_DIR</destination_directory>
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78 </action>
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79 <action type="chmod"><file mode="755">$INSTALL_DIR/fetchChromSizes</file></action>
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80 <action type="set_environment">
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81 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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82 </action>
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83 </actions>
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84 </install>
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85 <readme>
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86 </readme>
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87 </package>
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88 </tool_dependency>
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