Mercurial > repos > nikos > rna_probing_workflows
changeset 1:1289f656c8de draft
Uploaded
| author | nikos |
|---|---|
| date | Wed, 05 Nov 2014 10:59:33 -0500 |
| parents | 608dbf6d6196 |
| children | 5d3b73e7f899 |
| files | README.rst |
| diffstat | 1 files changed, 39 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Wed Nov 05 10:59:33 2014 -0500 @@ -0,0 +1,39 @@ +This package contains Galaxy workflows that perform RNA probing data analysis using the HRF-Seq method (Kielpinski and Vinther, 2014). + +See http://www.galaxyproject.org for information about the Galaxy Project. + + +Availability +============ + +These workflows are available to download and/or install from the Test Galaxy Tool Shed: + +http://toolshed.g2.bx.psu.edu/view/nikos/rna_probing_workflows + + +Reference Data +============== + +The workflows have been tested using RNase_P data (Treated and Control samples) from: + +* http://people.binf.ku.dk/jvinther/data/HRF-Seq/ + +Dependencies +============ + +These dependencies should be resolved automatically via the Galaxy Tool Shed: + +* http://testtoolshed.g2.bx.psu.edu/view/nikos/rna_probing +* http://testtoolshed.g2.bx.psu.edu/view/devteam/bowtie2 + + +History +======= + +======= ====================================================================== +Version Changes +------- ---------------------------------------------------------------------- +v0.0.1 - Initial release to Test Tool Shed (November, 2014) +======= ====================================================================== + +