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annotate tool_dependencies.xml @ 27:f33b89fe9f82 draft

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planemo upload for repository https://github.com/galaxyproject/dunovo commit b'e513259f9701a68e53baddaeedfa51406df857bf\n'-dirty
author nick
date Sat, 18 Feb 2017 04:10:19 -0500
parents 736ead34b470
children 71b765a4c494
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="bowtie2" version="2.1.0">
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4 <repository changeset_revision="606d435a57a4" name="package_bowtie2_2_1_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="samtools" version="0.1.18">
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7 <repository changeset_revision="f499719dad6e" name="package_samtools_0_1_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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9 <package name="mafft" version="7.221">
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10 <repository changeset_revision="dd4a533a0e3c" name="mafft" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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11 </package>
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12 <package name="networkx" version="1.9">
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13 <repository changeset_revision="2ca57555a756" name="package_networkx_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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14 </package>
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15 <package name="duplex" version="0.6.1">
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16 <install version="1.0">
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17 <actions>
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18 <action sha256sum="f4ee6ef4db6b97bd96bcfb79b18b2ed87b933c8bbbc26073390597da84683ee0" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.6.1.tar.gz</action>
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19 <action type="shell_command">make</action>
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20 <action type="move_directory_files">
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21 <source_directory>.</source_directory>
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22 <destination_directory>$INSTALL_DIR</destination_directory>
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23 </action>
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24 <action type="set_environment">
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25 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
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26 </action>
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27 </actions>
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28 </install>
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29 </package>
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30 </tool_dependency>