Mercurial > repos > mzeidler > virana2

changeset 35:4db3249f8544 draft

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Uploaded
author mzeidler
date Wed, 25 Sep 2013 08:47:42 -0400
parents d50aaf4471c1
children ff5f11d54af9
files vhom_region.xml
diffstat 1 files changed, 2 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/vhom_region.xml	Wed Sep 25 08:47:00 2013 -0400
+++ b/vhom_region.xml	Wed Sep 25 08:47:42 2013 -0400
@@ -5,6 +5,7 @@
 	<requirements>
         <requirement type="package" version="1.02.00">lastz</requirement>
         <requirement type="package" version="1.0">virana_python</requirement>
+        <requirement type="package" version="2.8">jalview</requirement>
     </requirements>
 
     <command interpreter="python">vhom_regionplot.py --html_file $hom_output --directory ${hom_output.files_path} --stats $stat_output
@@ -43,6 +44,7 @@
     
     --output_dir ${hom_output.files_path}
     
+    --jalview_jar_dir $JALVIEW_DIR
     
     --region_stats $stat_output
     </command>