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0
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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2
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3 <package name="perl" version="5.18.1">
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0
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4 <repository changeset_revision="95dad0955d7e" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="libgd" version="2.1.0">
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3
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7 <repository changeset_revision="1db2e8619504" name="package_libgd_2_1" owner="morinlab" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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0
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8 </package>
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9 <package name="circos_perl_environment" version="0.69">
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10 <install version="1.0">
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11 <actions>
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12 <action type="set_environment_for_install">
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3
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13 <repository changeset_revision="1db2e8619504" name="package_libgd_2_1" owner="morinlab" toolshed="https://testtoolshed.g2.bx.psu.edu">
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0
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14 <package name="libgd" version="2.1.0" />
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15 </repository>
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16 </action>
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17 <action type="setup_perl_environment">
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18 <repository changeset_revision="95dad0955d7e" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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2
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19 <package name="perl" version="5.18.1" />
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0
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20 </repository>
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21 <package>https://cpan.metacpan.org/authors/id/T/TL/TLINDEN/Config-General-2.55.tar.gz</package>
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22 <package>https://cpan.metacpan.org/authors/id/M/MH/MHOSKEN/Font-TTF-1.02.tar.gz</package>
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23 <package>http://circos.ca/distribution/lib/GD-2.53.tar.gz</package>
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24 <package>https://cpan.metacpan.org/authors/id/A/AD/ADAMK/List-MoreUtils-0.33.tar.gz</package>
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25 <package>https://cpan.metacpan.org/authors/id/A/AB/ABW/Math-Bezier-0.01.tar.gz</package>
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26 <package>https://cpan.metacpan.org/authors/id/G/GR/GROMMEL/Math-Round-0.06.tar.gz</package>
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27 <package>https://cpan.metacpan.org/authors/id/A/AS/ASPINELLI/Math-VecStat-0.08.tar.gz</package>
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28 <package>https://cpan.metacpan.org/authors/id/D/DR/DROLSKY/Params-Validate-1.07.tar.gz</package>
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29 <package>https://cpan.metacpan.org/authors/id/S/SA/SANKO/Readonly-1.04.tar.gz</package>
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30 <package>https://cpan.metacpan.org/authors/id/A/AB/ABIGAIL/Regexp-Common-2011121001.tar.gz</package>
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31 <package>https://cpan.metacpan.org/authors/id/S/SW/SWMCD/Set-IntSpan-1.16.tar.gz</package>
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32 <package>https://cpan.metacpan.org/authors/id/S/SH/SHLOMIF/Text-Format-0.58.tar.gz</package>
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33 <package>SVG</package>
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34 <package>Clone</package>
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35 <package>Params::Validate</package>
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36 <package>Statistics::Basic</package>
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37 <package>IO::String</package>
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38 </action>
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39 </actions>
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40 </install>
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41 </package>
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42 <package name="circos" version="0.69">
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43 <install version="1.0">
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44 <actions>
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45 <action type="download_by_url">http://circos.ca/distribution/circos-0.69.tgz</action>
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46 <action type="move_directory_files">
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47 <source_directory>.</source_directory>
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48 <destination_directory>$INSTALL_DIR</destination_directory>
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49 </action>
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50 <action type="set_environment">
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51 <environment_variable action="set_to" name="CIRCOS_INSTALL_DIR">$INSTALL_DIR</environment_variable>
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52 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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53 </action>
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54 </actions>
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55 </install>
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56 </package>
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57 </tool_dependency>
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