Mercurial > repos > morinlab > package_cancer_genomics_functions_1_0
changeset 0:54b4a501243f draft
Uploaded
| author | morinlab |
|---|---|
| date | Mon, 12 Sep 2016 15:30:25 -0400 |
| parents | |
| children | 1f875323d975 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 30 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Sep 12 15:30:25 2016 -0400 @@ -0,0 +1,30 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="R" version="3.2.1"> + <repository changeset_revision="77d439695328" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="cancer_genomics_functions" version="1.0"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://raw.githubusercontent.com/marcoalbuquerque-sfu/cancer_genomics_functions/master/functions.R</action> + <action type="setup_r_environment"> + <repository changeset_revision="77d439695328" name="package_r_3_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <package name="R" version="3.2.1" /> + </repository> + <package>https://cran.r-project.org/src/contrib/proto_0.3-10.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/findpython_1.0.1.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/getopt_1.20.0.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/rjson_0.2.15.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/argparse_1.0.1.tar.gz</package> + </action> + <action type="move_file"> + <source>functions.R</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="set_environment"> + <environment_variable action="set_to" name="CANCER_GENOMICS_FUNCTIONS_PATH">$INSTALL_DIR</environment_variable> + </action> + </actions> + </install> + </package> +</tool_dependency>