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author morinlab
date Mon, 05 Dec 2016 00:01:47 -0500
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<tool id="merge_seg_collection" name="Merge SEG Collection" version="1.0.0">
  <description> 
  Merge a collection of SEG files
  </description>
  <command>
  <![CDATA[

  #for $i, $f in enumerate($seg_collection)
    #if $i == 0
      cat $f >> $output;
    #else
      tail -n+1 $f >> $output;
    #end if
  #end for

  ]]>
  </command>
  <inputs>
    <param type="data_collection" format="tabular" collection_type="list"  name="seg_collection"/>
  </inputs>
  <outputs>
    <data format="tabular" name="output"/>
  </outputs>
</tool>