view rmarkdown_deseq2_count_matrix.Rmd @ 0:867a77a7a380 draft

planemo upload

---
title: 'DESeq2 analysis'
output:
    html_document:
      number_sections: true
      toc: true
      theme: cosmo
      highlight: tango
---

```{r setup, include=FALSE, warning=FALSE, message=FALSE}
knitr::opts_chunk$set(
  echo = opt$echo,
  error = TRUE
)
```


## Count Matrix

```{r 'count matrix'}
count_matrix = read.table(opt$count_matrix)
count_matrix
```

```{r 'ste[ 2'}

```