Mercurial > repos > mingchen0919 > rmarkdown_collection_builder

changeset 34:ae012f658711 draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 51c9df9f3f883537269f8928f92052457b29f744-dirty
author mingchen0919
date Tue, 26 Sep 2017 00:37:57 -0400
parents 8f969e11c561
children 3781d708af08
files collection_list.xml collection_list_paired.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/collection_list.xml	Tue Sep 26 00:23:43 2017 -0400
+++ b/collection_list.xml	Tue Sep 26 00:37:57 2017 -0400
@@ -45,7 +45,7 @@
     <outputs>
         <data format="html" name="report" label="Collection builder (list collection)" />
         <collection type="list" name="list_collection">
-            <discover_datasets pattern="__name_and_ext__" directory="files_directory" />
+            <discover_datasets directory="files_directory" />
         </collection>
     </outputs>
 </tool>
\ No newline at end of file
--- a/collection_list_paired.xml	Tue Sep 26 00:23:43 2017 -0400
+++ b/collection_list_paired.xml	Tue Sep 26 00:37:57 2017 -0400
@@ -47,7 +47,7 @@
     <outputs>
         <data format="html" name="report" label="Collection builder (list:paired collection)" />
         <collection type="list:paired" name="list_collection">
-            <discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.fq" ext="fastqsanger" directory="files_directory"/>
+            <discover_datasets pattern="__name_and_ext__" directory="files_directory"/>
         </collection>
     </outputs>
 </tool>
\ No newline at end of file