# HG changeset patch
# User mingchen0919
# Date 1506400677 14400
# Node ID ae012f6587115e8a8f1167548779fd2eba0ba8f5
# Parent  8f969e11c561c6aa8e50eddf4dfc0f98e8212e4d
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 51c9df9f3f883537269f8928f92052457b29f744-dirty

diff -r 8f969e11c561 -r ae012f658711 collection_list.xml
--- a/collection_list.xml	Tue Sep 26 00:23:43 2017 -0400
+++ b/collection_list.xml	Tue Sep 26 00:37:57 2017 -0400
@@ -45,7 +45,7 @@
     <outputs>
         <data format="html" name="report" label="Collection builder (list collection)" />
         <collection type="list" name="list_collection">
-            <discover_datasets pattern="__name_and_ext__" directory="files_directory" />
+            <discover_datasets directory="files_directory" />
         </collection>
     </outputs>
 </tool>
\ No newline at end of file
diff -r 8f969e11c561 -r ae012f658711 collection_list_paired.xml
--- a/collection_list_paired.xml	Tue Sep 26 00:23:43 2017 -0400
+++ b/collection_list_paired.xml	Tue Sep 26 00:37:57 2017 -0400
@@ -47,7 +47,7 @@
     <outputs>
         <data format="html" name="report" label="Collection builder (list:paired collection)" />
         <collection type="list:paired" name="list_collection">
-            <discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.fq" ext="fastqsanger" directory="files_directory"/>
+            <discover_datasets pattern="__name_and_ext__" directory="files_directory"/>
         </collection>
     </outputs>
 </tool>
\ No newline at end of file