Mercurial > repos > mingchen0919 > aurora_deseq2_site

annotate deseq2_site.sh @ 3:1faa864c0839 draft

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update 2.2.0
author mingchen0919
date Fri, 09 Mar 2018 09:06:06 -0500
parents 706ecfe0bac3
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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3
1faa864c0839 update 2.2.0
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1 Rscript '${__tool_directory__}/deseq2_site_render.R'
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2
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3 -e $echo
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4 -o $report
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5 -d $report.files_path
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6 -s $sink_message
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7 -t '${__tool_directory__}'
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8
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9 -A '$count_data'
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10 -B '$column_data'
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11 -C '$design_formula'
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12 -D '$treatment_name'
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13 -E '$treated'
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14 -F '$untreated'
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15 -G '$test_type'
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16 -H '$fit_type'
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17 -I '$alpha'
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18 -J '$significant_genes'