Mercurial > repos > matt-shirley > sra_tools
graph
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Disable caching, update descriptions, prune deprecated tools. draftTue, 03 Sep 2013 22:02:30 -0400, by Matt Shirley
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add option to take plaintext file with accession on one line draftMon, 05 Aug 2013 09:55:32 -0400, by Matt Shirley
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add option to take plaintext file with accession on one line draftMon, 05 Aug 2013 09:40:26 -0400, by Matt Shirley
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bring pileup to parity with sam; fixed minMapq for sam draftSun, 04 Aug 2013 23:17:53 -0400, by Matt Shirley
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Exposed more options for fastq_dump and sam_dump draftThu, 01 Aug 2013 13:57:27 -0400, by Matt Shirley
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debug prefetch caching and accession input for fastq_dump draftSun, 30 Jun 2013 11:27:51 -0400, by Matt Shirley
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debug prefetch caching and accession input for fastq_dump draftSun, 30 Jun 2013 11:12:31 -0400, by Matt Shirley
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debug prefetch caching and accession input for fastq_dump draftSat, 29 Jun 2013 16:14:32 -0400, by Matt Shirley
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debug prefetch caching and accession input for fastq_dump draftSat, 29 Jun 2013 16:01:28 -0400, by Matt Shirley
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debug prefetch caching and accession input for fastq_dump draftSat, 29 Jun 2013 15:53:14 -0400, by Matt Shirley
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debug prefetch caching and accession input for fastq_dump draftSat, 29 Jun 2013 15:49:44 -0400, by Matt Shirley
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implement prefetch caching and accession input for fastq_dump draftSat, 29 Jun 2013 11:14:03 -0400, by Matt Shirley
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more fixes for sra datatype, added sra_pileup draftWed, 19 Jun 2013 14:11:37 -0400, by Matt Shirley
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try static build to resolve missing libraries draftMon, 17 Jun 2013 21:22:17 -0400, by Matt Shirley
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better sra_fetch code, compliant (?) datatype, updated dependencies in tool wrappers draftMon, 17 Jun 2013 16:17:33 -0400, by Matt Shirley
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updated sra_toolkit dependency in <requirements> draftMon, 17 Jun 2013 14:26:40 -0400, by Matt Shirley
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tool dependencies for automated sra_sdk download and compilation draftWed, 29 May 2013 22:10:26 -0400, by Matt Shirley
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Initial version - still need to test if datatype works correctly, and implement scripted download of SRA binaries. draftTue, 27 Nov 2012 13:44:28 -0500, by matt-shirley