Mercurial > repos > lecorguille > ipo
changeset 5:d63c80d54b24 draft
planemo upload commit ed7e37099389cdc575d4163ed277b882a0043e5a-dirty
author | lecorguille |
---|---|
date | Thu, 29 Sep 2016 16:55:16 -0400 |
parents | 9fa5856f6184 |
children | 03fdfbd914ab |
files | ipo4xcmsSet.xml |
diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/ipo4xcmsSet.xml Thu Jul 28 11:11:38 2016 -0400 +++ b/ipo4xcmsSet.xml Thu Sep 29 16:55:16 2016 -0400 @@ -1,6 +1,6 @@ <tool id="ipo4xcmsSet" name="IPO for xcmsSet" version="0.0.3"> - <description>Filtration and Peak Identification using xcmsSet function from xcms R package to preprocess LC/MS data for relative quantification and statistical analysis </description> + <description>IPO optimization process for xcms.xcmsSet</description> <macros> <import>macros.xml</import> @@ -87,7 +87,7 @@ <when value="show"> <param name="snthresh" type="text" value="10" label="Range for Signal/Noise threshold" help="[snthresh] Signal to noise ratio cutoff (ex: 10 or 5,15)" /> <param name="mzdiff" type="text" value="-0.001" label="Range for Min m/z difference" help="[mzdiff] Min m/z difference for peaks with overlapping RT (ex: -0.001 or -0.001,0.010)" /> - <param name="integrate" type="select" label="Peak limits method" help="[integrate]" multiple="true" > + <param name="integrate" type="select" label="Peak limits method" help="[integrate]" > <option value="1">1 - peak limits based on smoothed 2nd derivative (less precise)</option> <option value="2">2 - peak limits based on real data (more sensitive to noise)</option> </param>