view vennerable/tool_dependencies.xml @ 0:77bbf955e8de default tip

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author eric
date Thu, 06 Nov 2014 15:07:54 +0100
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<?xml version="1.0"?>
<tool_dependency>
	<set_environment>
            <environment_variable name="VENNERABLE_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
    </set_environment>
	<package name="R" version="3.0.3">
		<repository changeset_revision="9ff23e0b280b" name="package_r_3_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu/" prior_installation_required="True"/>
	</package>
	<package name="vennerable_r_packages" version="1.0">
		<install version="1.0">
			<actions>
				<action type="setup_r_environment">
					<repository changeset_revision="9ff23e0b280b" name="package_r_3_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu/">
						<package name="R" version="3.0.3" />
					</repository>
					<package>http://www.bioconductor.org/packages/2.13/bioc/src/contrib/BiocGenerics_0.8.0.tar.gz</package>
					<package>http://www.bioconductor.org/packages/2.13/bioc/src/contrib/graph_1.40.1.tar.gz</package>
					<package>http://www.bioconductor.org/packages/2.13/bioc/src/contrib/RBGL_1.38.0.tar.gz</package>
					<package>http://cran.r-project.org/src/contrib/Archive/RColorBrewer/RColorBrewer_1.0-4.tar.gz</package>
					<package>http://cran.r-project.org/src/contrib/Archive/Rcpp/Rcpp_0.11.2.tar.gz</package>
					<package>http://cran.r-project.org/src/contrib/Archive/plyr/plyr_1.8.tar.gz</package>
					<package>http://cran.r-project.org/src/contrib/Archive/reshape/reshape_0.8.4.tar.gz</package>
					<package>http://cran.r-project.org/src/contrib/Archive/gtools/gtools_3.4.0.tar.gz</package>
					<package>http://cran.r-project.org/src/contrib/Archive/xtable/xtable_1.7-3.tar.gz</package>
					<package>http://download.r-forge.r-project.org/src/contrib/Vennerable_3.0.tar.gz</package>
				</action>
			</actions>
		</install>
		<readme></readme>
	</package>
</tool_dependency>