Mercurial > repos > kuyt002 > vennerable_r

annotate vennerable/tool_dependencies.xml @ 0:77bbf955e8de default tip

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author eric
date Thu, 06 Nov 2014 15:07:54 +0100
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <set_environment>
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4 <environment_variable name="VENNERABLE_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
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5 </set_environment>
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6 <package name="R" version="3.0.3">
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7 <repository changeset_revision="9ff23e0b280b" name="package_r_3_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu/" prior_installation_required="True"/>
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8 </package>
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9 <package name="vennerable_r_packages" version="1.0">
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10 <install version="1.0">
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11 <actions>
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12 <action type="setup_r_environment">
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13 <repository changeset_revision="9ff23e0b280b" name="package_r_3_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu/">
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14 <package name="R" version="3.0.3" />
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15 </repository>
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16 <package>http://www.bioconductor.org/packages/2.13/bioc/src/contrib/BiocGenerics_0.8.0.tar.gz</package>
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17 <package>http://www.bioconductor.org/packages/2.13/bioc/src/contrib/graph_1.40.1.tar.gz</package>
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18 <package>http://www.bioconductor.org/packages/2.13/bioc/src/contrib/RBGL_1.38.0.tar.gz</package>
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19 <package>http://cran.r-project.org/src/contrib/Archive/RColorBrewer/RColorBrewer_1.0-4.tar.gz</package>
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20 <package>http://cran.r-project.org/src/contrib/Archive/Rcpp/Rcpp_0.11.2.tar.gz</package>
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21 <package>http://cran.r-project.org/src/contrib/Archive/plyr/plyr_1.8.tar.gz</package>
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22 <package>http://cran.r-project.org/src/contrib/Archive/reshape/reshape_0.8.4.tar.gz</package>
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23 <package>http://cran.r-project.org/src/contrib/Archive/gtools/gtools_3.4.0.tar.gz</package>
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24 <package>http://cran.r-project.org/src/contrib/Archive/xtable/xtable_1.7-3.tar.gz</package>
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25 <package>http://download.r-forge.r-project.org/src/contrib/Vennerable_3.0.tar.gz</package>
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26 </action>
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27 </actions>
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28 </install>
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29 <readme></readme>
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30 </package>
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31 </tool_dependency>
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