Mercurial > repos > kpbioteam > minfi_getbeta

view minfi_getbeta.R @ 4:cd6144e8c8ca draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 0590dcbf1cff7e99b97e2c33e1bfe2a4d9b447aa-dirty
author kpbioteam
date Wed, 27 Jun 2018 14:34:55 -0400
parents 4953a5a6c006
children
line wrap: on
line source

require("minfi", quietly = TRUE)

args <- commandArgs(trailingOnly = TRUE)

input = args[1] 
output = args[2]

RSet <- get(load(input))

beta <- getBeta(RSet)

write.table(beta, file = output, quote = FALSE, sep = "\t")