Mercurial > repos > kpbioteam > minfi_getbeta

annotate minfi_getbeta.R @ 4:cd6144e8c8ca draft default tip

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planemo upload commit 0590dcbf1cff7e99b97e2c33e1bfe2a4d9b447aa-dirty
author kpbioteam
date Wed, 27 Jun 2018 14:34:55 -0400
parents 4953a5a6c006
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1 require("minfi", quietly = TRUE)
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3 args <- commandArgs(trailingOnly = TRUE)
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5 input = args[1]
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6 output = args[2]
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8 RSet <- get(load(input))
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10 beta <- getBeta(RSet)
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4953a5a6c006 planemo upload commit 0590dcbf1cff7e99b97e2c33e1bfe2a4d9b447aa
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12 write.table(beta, file = output, quote = FALSE, sep = "\t")
4953a5a6c006 planemo upload commit 0590dcbf1cff7e99b97e2c33e1bfe2a4d9b447aa
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4953a5a6c006 planemo upload commit 0590dcbf1cff7e99b97e2c33e1bfe2a4d9b447aa
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