comparison tool_dependencies.xml @ 20:d75e6bb92a05

Uploaded

19:42695914c1bd

<?xml version="1.0"?>
<tool_dependency>
    <package name="ontologizer-jar" version="0.0.1">
        <install version="1.0">
            <actions>
                <action type="shell_command">curl --silent --show-error --output ./ontologizer.jar http://compbio.charite.de/contao/index.php/cmdlineOntologizer.html?file=tl_files/ontologizer/cmdline/Ontologizer.jar</action>
                 <action type="move_file">
                    <source>ontologizer.jar</source>
                    <destination>$INSTALL_DIR</destination>
                </action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            ontologizer requires java and curl to be installed.
        </readme>

20:d75e6bb92a05

<?xml version="1.0"?>
<tool_dependency>
    <package name="ontologizer-jar" version="0.0.1">
        <install version="1.0">
            <actions>
                <action type="shell_command">curl --silent --show-error --output $INSTALL_DIR/ontologizer.jar http://compbio.charite.de/contao/index.php/cmdlineOntologizer.html?file=tl_files/ontologizer/cmdline/Ontologizer.jar</action>
                <action type="shell_command">echo 'ONTOLOGIZER_JAR=$INSTALL_DIR/ontologizer;export \$ONTOLOGIZER_JAR > $INSTALL_DIR/env.sh'</action>
            </actions>
        </install>
        <readme>
            ontologizer requires java and curl to be installed.
        </readme>