Mercurial > repos > jjohnson > shear
changeset 5:aaaa5a071ff0
Update to SHEAR v 0.2.3
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 17 Oct 2013 08:01:38 -0500 |
| parents | a82400332451 |
| children | 0158f7356ffd |
| files | shear_assemble.xml shear_sv.xml tool_dependencies.xml |
| diffstat | 3 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/shear_assemble.xml Tue Jul 16 12:38:48 2013 -0500 +++ b/shear_assemble.xml Thu Oct 17 08:01:38 2013 -0500 @@ -1,7 +1,7 @@ -<tool id="shear_assemble" name="SHEAR-Assemble" version="0.0.1"> +<tool id="shear_assemble" name="SHEAR-Assemble" version="0.0.2"> <description>create a personal genome from sdi</description> <requirements> - <requirement type="package" version="0.1.2">shear</requirement> + <requirement type="package" version="0.2.3">shear</requirement> </requirements> <!-- <version_command></version_command>
--- a/shear_sv.xml Tue Jul 16 12:38:48 2013 -0500 +++ b/shear_sv.xml Thu Oct 17 08:01:38 2013 -0500 @@ -1,8 +1,8 @@ <?xml version="1.0"?> -<tool id="shear_sv" name="SHEAR-SV" version="0.0.1"> +<tool id="shear_sv" name="SHEAR-SV" version="0.0.2"> <description>find SVs and estimate the heterogeneity levels from a BAM</description> <requirements> - <requirement type="package" version="0.1.2">shear</requirement> + <requirement type="package" version="0.2.3">shear</requirement> <requirement type="package" version="0.1.18">samtools</requirement> <requirement type="package" version="0.6.2">bwa</requirement> <requirement type="package" version="1.0.1">crest</requirement>
--- a/tool_dependencies.xml Tue Jul 16 12:38:48 2013 -0500 +++ b/tool_dependencies.xml Thu Oct 17 08:01:38 2013 -0500 @@ -17,8 +17,8 @@ cap3 which only has binary executable downloads from: http://seq.cs.iastate.edu/cap3.html </readme> </package> - <package name="shear" version="0.1.2"> - <repository changeset_revision="c2ab94f12a7a" name="package_shear_0_1_2" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + <package name="shear" version="0.2.3"> + <repository changeset_revision="8bcf811b9c1e" name="package_shear_0_2_3" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>