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Update to SHEAR v 0.2.3
author Jim Johnson <jj@umn.edu>
date Thu, 17 Oct 2013 08:01:38 -0500
parents a82400332451
children 8180f6b0249b
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<?xml version="1.0"?>
<tool_dependency>
    <package name="samtools" version="0.1.18">
        <repository changeset_revision="5f7ec5048224" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="bwa" version="0.6.2">
        <repository changeset_revision="8be5fbfc1548" name="package_bwa_0_6_2" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="kent" version="latest">
        <repository changeset_revision="b05b788e3989" name="package_kent" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="crest" version="1.0.1">
        <repository changeset_revision="89a9d6ce7f96" name="package_crest_1_0_1" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
          <readme>
CREST requires: 
  Bioperl package Bio::DB:Sam  
  cap3 which only has binary executable downloads from:   http://seq.cs.iastate.edu/cap3.html
          </readme>
    </package>
    <package name="shear" version="0.2.3">
        <repository changeset_revision="8bcf811b9c1e" name="package_shear_0_2_3" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>

</tool_dependency>