Mercurial > repos > jfb > kinamine

changeset 13:6dcc7dca5738 draft

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Uploaded
author jfb
date Tue, 27 Feb 2018 11:47:48 -0500
parents c39370503745
children 2786edcac838
files zippable Kinamine-JJ/KinaMine.jar zippable Kinamine-JJ/Kinamine.xml
diffstat 2 files changed, 1 insertions(+), 1 deletions(-) [+]
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Binary file zippable Kinamine-JJ/KinaMine.jar has changed
--- a/zippable Kinamine-JJ/Kinamine.xml	Thu Feb 22 16:37:40 2018 -0500
+++ b/zippable Kinamine-JJ/Kinamine.xml	Tue Feb 27 11:47:48 2018 -0500
@@ -33,7 +33,7 @@
     <help><![CDATA[
 Kinamine takes a Distinct Peptide Report and extracts from it all peptides containing a phospho(Y), along with the 7 amino acids N- and C- terminal to the pY in that peptide (assuming they were discovered at a threshold above the given FDR value).  This file is the *Substrates* file
 Additionally, all discovered peptides are assumed to have come from a protein.  For every phospho(Y) peptide, KinaMine takes the associated protein accession number, searches the FASTA file for that accession number and returns the amino acid percent composition of the protein(s) which that peptide came from.  This file is the *Substrate Background Frequency* file
-This tool is intended to be used in conjunction with Negative Motif Finder and Kinatest.R, the three together creating a GalaxyP version of the KINATEST-ID workbook.
+This tool is intended to be used in conjunction with Negative Motif Finder and Kinatest, the three together creating a GalaxyP version of the KINATEST-ID workbook.
 
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