# HG changeset patch
# User jfb
# Date 1519750068 18000
# Node ID 6dcc7dca573822d6a0932989b99861e86bd4ade1
# Parent  c39370503745768a3ea3a519093eb772ca7c612c
Uploaded

diff -r c39370503745 -r 6dcc7dca5738 zippable Kinamine-JJ/KinaMine.jar
Binary file zippable Kinamine-JJ/KinaMine.jar has changed
diff -r c39370503745 -r 6dcc7dca5738 zippable Kinamine-JJ/Kinamine.xml
--- a/zippable Kinamine-JJ/Kinamine.xml	Thu Feb 22 16:37:40 2018 -0500
+++ b/zippable Kinamine-JJ/Kinamine.xml	Tue Feb 27 11:47:48 2018 -0500
@@ -33,7 +33,7 @@
     <help><![CDATA[
 Kinamine takes a Distinct Peptide Report and extracts from it all peptides containing a phospho(Y), along with the 7 amino acids N- and C- terminal to the pY in that peptide (assuming they were discovered at a threshold above the given FDR value).  This file is the *Substrates* file
 Additionally, all discovered peptides are assumed to have come from a protein.  For every phospho(Y) peptide, KinaMine takes the associated protein accession number, searches the FASTA file for that accession number and returns the amino acid percent composition of the protein(s) which that peptide came from.  This file is the *Substrate Background Frequency* file
-This tool is intended to be used in conjunction with Negative Motif Finder and Kinatest.R, the three together creating a GalaxyP version of the KINATEST-ID workbook.
+This tool is intended to be used in conjunction with Negative Motif Finder and Kinatest, the three together creating a GalaxyP version of the KINATEST-ID workbook.
 
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