Mercurial > repos > jeremie > package_breakdancer_1_2_6

changeset 51:5bb7278d6da6 draft

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Uploaded
author jeremie
date Tue, 01 Jul 2014 05:01:52 -0400
parents 469d6925d15e
children d73b6c1ce7e6
files tool_dependencies.xml
diffstat 1 files changed, 7 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Jul 01 04:51:14 2014 -0400
+++ b/tool_dependencies.xml	Tue Jul 01 05:01:52 2014 -0400
@@ -3,14 +3,14 @@
     <package name="breakdancer" version="1.2.6">
         <install version="1.0">
             <actions_group>
-                <actions architecture="i386" os="linux">
+            <!--     <actions architecture="i386" os="linux">
                     <action type="download_by_url">http://depot.galaxyproject.org/package/linux/i386/freebayes/freebayes-0.9.6_9608597d-Linux-i686.tgz</action>
                     <action type="move_directory_files">
                         <source_directory>.</source_directory>
                         <destination_directory>$INSTALL_DIR/bin</destination_directory>
                     </action>       
-                </actions>                
-                <actions architecture="x86_64" os="linux">
+                </actions>     -->            
+                <actions>
                     <action type="download_by_url">https://github.com/genome/breakdancer/archive/master.zip</action>
                     <action type="shell_command">mkdir build</action>
                     <action type="change_directory">build</action>
@@ -24,11 +24,11 @@
                     <action type="move_directory_files">
                         <source_directory>.</source_directory>
                         <destination_directory>$INSTALL_DIR/bin</destination_directory>
-                    </action>       
+                    </action>      
+                    <action type="set_environment">
+                        <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    </action>
                 </actions>                     
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                </action>
             </actions_group>
         </install>
         <readme>