Mercurial > repos > jeremie > package_breakdancer_1_2_6
changeset 61:1c615a6bb33d draft
Uploaded
author | jeremie |
---|---|
date | Tue, 01 Jul 2014 11:01:57 -0400 |
parents | 658df950d731 |
children | 4409b508f8a5 |
files | tool_dependencies.xml |
diffstat | 1 files changed, 7 insertions(+), 7 deletions(-) [+] |
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--- a/tool_dependencies.xml Tue Jul 01 10:55:51 2014 -0400 +++ b/tool_dependencies.xml Tue Jul 01 11:01:57 2014 -0400 @@ -17,24 +17,24 @@ <action type="change_directory">build</action> <action type="shell_command">cmake .. -DCMAKE_BUILD_TYPE=release -DCMAKE_INSTALL_PREFIX=/usr/local</action> <action type="shell_command">make</action> - <!-- <action type="move_file"> + <action type="move_file"> <source>bin/breakdancer-max</source> <destination>$INSTALL_DIR/bin</destination> </action> <action type="move_file"> <source>../perl/bam2cfg.pl</source> <destination>$INSTALL_DIR/bin</destination> - </action> --> + </action> <!-- <action type="download_by_url">http://9ypffrj86h.1fichier.com/breakdancer2vcf.py</action> --> - <action type="shell_command">wget https://github.com/ALLBio/allbiotc2/blob/master/breakdancer/breakdancer2vcf.py</action> - <!-- <action type="move_file"> + <action type="shell_command">wget https://raw.githubusercontent.com/ALLBio/allbiotc2/master/breakdancer/breakdancer2vcf.py</action> + <action type="move_file"> <source>breakdancer2vcf.py</source> <destination>$INSTALL_DIR/bin</destination> - </action> --> - <action type="move_directory_files"> + </action> + <!-- <action type="move_directory_files"> <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> - </action> + </action> --> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> </action>