Mercurial > repos > jeremie > breakdancer_test
changeset 25:d05d0c77b021 draft
Uploaded
author | jeremie |
---|---|
date | Tue, 01 Jul 2014 10:35:15 -0400 |
parents | 1e5783684391 |
children | acec6ba9884a |
files | breakdancer.py |
diffstat | 1 files changed, 3 insertions(+), 1 deletions(-) [+] |
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--- a/breakdancer.py Tue Jul 01 10:20:25 2014 -0400 +++ b/breakdancer.py Tue Jul 01 10:35:15 2014 -0400 @@ -16,7 +16,9 @@ currentDir = os.path.dirname(os.path.abspath(__file__)) binPath = os.environ['BREAKDANCER_BIN'] -bam2cfg = binPath+"/bam2cfg.pl" +print(binPath) +print(str(binPath)) +bam2cfg = str(binPath)+"/bam2cfg.pl" breakdancer = binPath+"/breakdancer-max" breakdancer2vcf = binPath+"/breakdancer2vcf.py"