Mercurial > repos > jeremie > breakdancer_test
changeset 26:acec6ba9884a draft
Uploaded
author | jeremie |
---|---|
date | Tue, 01 Jul 2014 10:39:41 -0400 |
parents | d05d0c77b021 |
children | 463a9ed9655b |
files | breakdancer.py |
diffstat | 1 files changed, 5 insertions(+), 2 deletions(-) [+] |
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--- a/breakdancer.py Tue Jul 01 10:35:15 2014 -0400 +++ b/breakdancer.py Tue Jul 01 10:39:41 2014 -0400 @@ -16,8 +16,11 @@ currentDir = os.path.dirname(os.path.abspath(__file__)) binPath = os.environ['BREAKDANCER_BIN'] -print(binPath) -print(str(binPath)) +print("--"+binPath+"--") +# print(str(binPath)) +binPath=binPath[:-1] +print("--"+binPath+"--") + bam2cfg = str(binPath)+"/bam2cfg.pl" breakdancer = binPath+"/breakdancer-max" breakdancer2vcf = binPath+"/breakdancer2vcf.py"