Mercurial > repos > jeremie > breakdancer_test

changeset 26:acec6ba9884a draft

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Uploaded
author jeremie
date Tue, 01 Jul 2014 10:39:41 -0400
parents d05d0c77b021
children 463a9ed9655b
files breakdancer.py
diffstat 1 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/breakdancer.py	Tue Jul 01 10:35:15 2014 -0400
+++ b/breakdancer.py	Tue Jul 01 10:39:41 2014 -0400
@@ -16,8 +16,11 @@
 currentDir = os.path.dirname(os.path.abspath(__file__))
 
 binPath = os.environ['BREAKDANCER_BIN']
-print(binPath)
-print(str(binPath))
+print("--"+binPath+"--")
+# print(str(binPath))
+binPath=binPath[:-1]
+print("--"+binPath+"--")
+
 bam2cfg = str(binPath)+"/bam2cfg.pl"
 breakdancer = binPath+"/breakdancer-max"
 breakdancer2vcf = binPath+"/breakdancer2vcf.py"