Mercurial > repos > jeremie > breakdancer_test
view breakdancer.xml @ 25:d05d0c77b021 draft
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author | jeremie |
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date | Tue, 01 Jul 2014 10:35:15 -0400 |
parents | 298a0a61a20d |
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<tool id="breakdancer" name="breakdancer" version="1.2.6"> <requirements> <requirement type="package" version="1.2.6">breakdancer</requirement> </requirements> <description></description> <parallelism method="basic"></parallelism> <command interpreter="python"> breakdancer.py -i1 $input -o1 $output_raw -o2 $output_vcf </command> <inputs> <param format="bam" name="input" type="data" help="" label="bam file" /> </inputs> <outputs> <data name="output_raw" format="tabular" label="breakdancer raw" /> <data name="output_vcf" format="vcf" label="breakdancer vcf" /> </outputs> <help> </help> </tool>