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1 <tool id="V19.10_inst_scilab" name="Install Scilab-6.1.1" version="0.0.1">
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2 <description> install scilab </description>
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3
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4 <stdio>
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5 <exit_code range="1:" level="fatal" />
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6 </stdio>
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7
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8
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9 <command><![CDATA[
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10 if [ ! -d $__root_dir__/packages/scilab-6.1.1 ]; then wget -P $__root_dir__/packages/ https://www.scilab.org/download/6.1.1/scilab-6.1.1.bin.linux-x86_64.tar.gz && tar -xvf $__root_dir__/packages/scilab-6.1.1.bin.linux-x86_64.tar.gz -C $__root_dir__/packages/ && rm $__root_dir__/packages/scilab-6.1.1.bin.linux-x86_64.tar.gz; else $__root_dir__/packages/scilab-6.1.1/bin/scilab-cli -nb -quit -f $* < ${script_file}; fi
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11 ]]>
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12 </command>
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13
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14
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15 <configfiles>
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16 <configfile name="script_file">
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17 <![CDATA[ if ~isdef('pls') then ...
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18 atomsSystemUpdate(); ...
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19 atomsInstall('FACT'); ...
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20 atomsLoad('FACT'); ...
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21 end; ...
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22 x=${Xvalue}; ...
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23 y=2*div(x); ...
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24 y2=y.d; ...
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25 ${Result}=y2; ]]>
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26 </configfile>
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27 </configfiles>
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28
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29
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30 <inputs>
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31 <param name="Xvalue" type="data" formar="tabular" label="Input matrix of data" />
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32 </inputs>
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33
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34
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35 <outputs>
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36 <data name="Result" format="tabular" label="Res"/>
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37 </outputs>
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38
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39 <tests>
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40 <test>
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41 <param name="Xvalue" value="X2.tabular"/>
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42
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43 <output name="Result" >
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44 <assert_contents>
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45 <has_text text="436"/>
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46 <has_text text="4240"/>
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47 </assert_contents>
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48 </output>
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49
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50 </test>
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51 </tests>
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52
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53
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54
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55
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56
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57 <help><![CDATA[
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58
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59 .. class:: warningmark
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60
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61 **TIP:** If your data is not TAB delimited, use *Convert format data Tools->Convert*
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62
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63 ----------------------------------------------------------------------
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64
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65
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66 ===========================================
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67 INSTALLATION OF SCILAB AND ITS FACT TOOLBOX
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68 ===========================================
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69
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70
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71 -----------
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72 Description
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73 -----------
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74
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75 This functions performs two processes: 1) the download + unzip of Scilab-6.1.1 in the folder: galaxy/packages/scilab-6.1.1, 2) the installation of the FACT toolbox in Scilab.
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76
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77 Once Scilab+Fact have been correctly installed, this function can be removed from the Galaxy menu.
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78
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79
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80 -----------
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81 Input files
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82 -----------
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83
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84
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85 **Xvalue**
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86
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87 An integer
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88
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89
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90 ------------
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91 Output files
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92 ------------
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93
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94 **Result**
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95
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96 The input value multiplied by 2
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97
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98
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99 ]]>
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100 </help>
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101
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102
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103 <citations>
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1
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104
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105 </citations>
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106
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107 </tool>
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