view install_scilab611_fact.xml @ 2:6c01f5306618 draft

Uploaded

<tool id="V19.10_inst_scilab" name="Install Scilab-6.1.1" version="0.0.1">
  <description>  install scilab </description>

  <stdio> 
    <exit_code range="1:" level="fatal" />
  </stdio>  


 <command><![CDATA[ 
if [ ! -d $__root_dir__/packages/scilab-6.1.1 ]; then wget -P $__root_dir__/packages/ https://www.scilab.org/download/6.1.1/scilab-6.1.1.bin.linux-x86_64.tar.gz && tar -xvf $__root_dir__/packages/scilab-6.1.1.bin.linux-x86_64.tar.gz -C $__root_dir__/packages/ && rm $__root_dir__/packages/scilab-6.1.1.bin.linux-x86_64.tar.gz; fi; $__root_dir__/packages/scilab-6.1.1/bin/scilab-cli -nb -quit -f $* < ${script_file}
]]>
 </command>


 <configfiles>
    <configfile name="script_file">
      <![CDATA[ if ~isdef('pls') then ...
                  atomsSystemUpdate(); ...
                  atomsInstall('FACT'); ...
                  atomsLoad('FACT'); ...
                end; ...
                x=${Xvalue}; ...
                y=2*div(x); ...
                y2=y.d; ...
                ${Result}=y2;  ]]>
   </configfile>
  </configfiles>


  <inputs>
      <param name="Xvalue"     type="data" formar="tabular" label="Input matrix of data" />
  </inputs>


  <outputs>
    <data name="Result"   format="tabular"  label="Res"/>
  </outputs>

 <tests>
    <test>
      <param name="Xvalue" value="X2.tabular"/>
    
      <output name="Result" >
      <assert_contents> 
          <has_text text="436"/>
          <has_text text="4240"/>
      </assert_contents>
       </output>

    </test>
  </tests> 





<help><![CDATA[

.. class:: warningmark

**TIP:** If your data is not TAB delimited, use *Convert format data Tools-&gt;Convert*

----------------------------------------------------------------------


===========================================
INSTALLATION OF SCILAB AND ITS FACT TOOLBOX 
===========================================


-----------
Description
-----------

This functions performs two processes: 1) the download + unzip of Scilab-6.1.1 in the folder: galaxy/packages/scilab-6.1.1, 2) the installation of the FACT toolbox in Scilab. 

Once Scilab+Fact have been correctly installed, this function can be removed from the Galaxy menu. 


-----------
Input files
-----------


**Xvalue**

An integer 


------------
Output files
------------

**Result**

The input value multiplied by 2


 ]]>
</help>


<citations>

</citations> 

</tool>