Mercurial > repos > jcb-mpl > eics_merged
view 2018_07_mz_merged.xml @ 0:9d99f060a07f draft
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author | jcb-mpl |
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date | Tue, 27 Apr 2021 14:34:41 +0000 |
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children | 5d0e02a75d04 |
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<tool id="2021_05_eics_merged" name="EICs-synchronized -> EICs-merged" version="0.0.1"> <description> </description> <requirements> <requirement type="package" >scilab</requirement> </requirements> <stdio> <exit_code range="1:" level="fatal" /> </stdio> <command> <![CDATA[ if [ -d $__root_dir__/packages/scilab-6.1.0 ]; then $__root_dir__/packages/scilab-6.1.0/bin/scilab-cli -nb -quit -f $* < ${script_file}; else scilab-cli -nb -quit -f $* < ${script_file}; fi ]]> </command> <configfiles> <configfile name="script_file"> <![CDATA[ exec("$__tool_directory__/src/mz_8_merge_list_x_tr_mz4.sci",-1); ... lasterror(); ... load("${list_eic4_files}"); ... // la variable s'appelle: list_eic4_files [x_tr_mz4,ppm_coupe]=mz_8_merge_list_x_tr_mz4(list_eic4_files); ... ... ... // save("${merged_x_tr_mz4file}",'x_tr_mz4'); ... div2tab(x_tr_mz4,"${merged_x_tr_mz4file}"); ... ... if ~isempty(lasterror(%f)) then ... write(0,lasterror()); ... end; ]]> </configfile> </configfiles> <inputs> <param name="list_eic4_files" format="mat" type="data" label="Select X data" help="a list of EIC-synchronized files with all the same mz values "/> </inputs> <outputs> <data name="merged_x_tr_mz4file" format="tabular" label="EICs-merged"/> </outputs> <tests> <test> <param name="list_eic4_files" value="EICs-synchronized.mat"/> <output name="merged_x_tr_mz4file" file="EICs-merged.tab" compare="sim_size" delta="1000" /> </test> </tests> <help> .. class:: infomark **Authors** Jean-Claude Boulet (INRAE) --------------------------------------------------- ======================================= MOYENNE PLUSIEURS FICHIERS DANS UN SEUL ======================================= ----------- Description ----------- Les donnees d'entree sont des fichiers d'EIC (TRi x m/z), ayant des TR differents mais les mêmes m/z. Cette fonction moyenne les fichiers d'entree dans un seul fichier (TR x m/z). ----------- Input files ----------- Au moins deux fichiers d'EICs individuelles ------------ Output files ------------ **Un fichier (TR x m/z)** obtenu en moyennant les fichiers donnés en entrée </help> <citations> </citations> </tool>