Mercurial > repos > jcb-mpl > detrend
changeset 1:c55240b22f3e draft
Uploaded
| author | jcb-mpl |
|---|---|
| date | Fri, 03 May 2019 16:49:11 -0400 |
| parents | 6e7e32f72354 |
| children | f478340e107e |
| files | detrend_sci602.xml |
| diffstat | 1 files changed, 22 insertions(+), 17 deletions(-) [+] |
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--- a/detrend_sci602.xml Mon Apr 29 17:18:56 2019 -0400 +++ b/detrend_sci602.xml Fri May 03 16:49:11 2019 -0400 @@ -1,30 +1,35 @@ -<tool id="V18.10_detrend_sci602" name="DT" version="0.0.1"> +<tool id="V18.10_detrend_sci602bis" name="DT" version="0.0.1"> <description> Detrend </description> <requirements> - <requirement type="package" version="6.0.2">Scilab</requirement> - <requirement type="package" version="1.0">FACT</requirement> + </requirements> + +<stdio> +<exit_code range="1:" level="fatal" /> +</stdio> - <command interpreter="bash">scilab602_wrapper.sh $script_file</command> +<command><![CDATA[ +if [ ! -d $__root_dir__/database/dependencies/scilab-6.0.2 ]; then echo 'cp -r . $__root_dir__/database/dependencies' >> $__tool_directory__/conda_scilab6.0.2/build.sh; conda-build $__tool_directory__/conda_scilab6.0.2; else $__root_dir__/database/dependencies/scilab-6.0.2/bin/scilab-cli -nb -f '$script_file'; fi +]]> + </command> - <configfiles> + + <configfiles> <configfile name="script_file"> - ... //Verification de l'installation de Scilab - if ~isdef('pls') then ... - atomsInstall('FACT'); ... + if ~isdef('pls') then ... + atomsInstall('FACT'); ... + atomsLoad('FACT'); ... end; ... - ... - x=glx_tab2div("${Xdata.file_name}"); ... //importation des donnees - ... - x2=detrending(x,${degre}); ... // calcul de detrend - ... - kill=div2tab(x2,"${DT}"); ... // Export des resultats - if ~isempty(lasterror(%f)); ... //ecrit le message d'erreur dans stderr si erreur - write(0,lasterror()); ... - end; + x=glx_tab2div("${Xdata.file_name}"); ... + x2=detrending(x,${degre}); ... + kill=div2tab(x2,"${DT}"); ... + if ~isempty(lasterror(%f)) ... + write(0,lasterror()) ... + end </configfile> </configfiles> + <inputs> <param name="Xdata" format="tabular" type="data" label="Select X data" help="Dataset (n x p) containing the n spectra of p variables."/> <param name="degre" type="integer" value="2" min="0" max="5" label="Degree of the polynom"/>