Mercurial > repos > jbrayet > ccat_1_0_docker

changeset 14:876655b15db4 draft

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Uploaded
author jbrayet
date Thu, 21 Jan 2016 10:41:22 -0500
parents 64e89aad3ee5
children e07fc2fd6bdc
files ccat_wrapper.xml
diffstat 1 files changed, 3 insertions(+), 21 deletions(-) [+]
line wrap: on
line diff
--- a/ccat_wrapper.xml	Thu Jan 21 10:38:25 2016 -0500
+++ b/ccat_wrapper.xml	Thu Jan 21 10:41:22 2016 -0500
@@ -45,27 +45,9 @@
     </conditional>
 </inputs>
   <outputs>
-    <data name="output_peak_file" format="interval" label="${tool.name} on ${on_string} (peaks)">
-      <actions>
-        <action type="metadata" name="chromCol" default="1"/>
-        <action type="metadata" name="startCol" default="3"/>
-        <action type="metadata" name="endCol" default="4"/>
-      </actions>
-    </data>
-    <data name="output_region_file" format="interval" label="${tool.name} on ${on_string} (regions)">
-      <actions>
-        <action type="metadata" name="chromCol" default="1"/>
-        <action type="metadata" name="startCol" default="3"/>
-        <action type="metadata" name="endCol" default="4"/>
-      </actions>
-    </data>
-    <data name="output_top_file" format="interval" label="${tool.name} on ${on_string} (top peaks)">
-      <actions>
-        <action type="metadata" name="chromCol" default="1"/>
-        <action type="metadata" name="startCol" default="3"/>
-        <action type="metadata" name="endCol" default="4"/>
-      </actions>
-    </data>
+    <data name="output_peak_file" format="interval" label="${tool.name} on ${on_string} (peaks)" />
+    <data name="output_region_file" format="interval" label="${tool.name} on ${on_string} (regions)" />
+    <data name="output_top_file" format="interval" label="${tool.name} on ${on_string} (top peaks)" />
     <data name="output_log_file" format="txt" label="${tool.name} on ${on_string} (log)"/>
   </outputs>
   <configfiles>