Mercurial > repos > iuc > package_vienna_rna_2_1

changeset 4:bb91a5b178e2 draft

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Uploaded
author iuc
date Thu, 12 Feb 2015 11:37:02 -0500
parents fd7b24b10a6a
children 07f4f60bfd1b
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Feb 09 06:08:11 2015 -0500
+++ b/tool_dependencies.xml	Thu Feb 12 11:37:02 2015 -0500
@@ -1,24 +1,23 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="perl" version="5.18.1">
-        <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="f6efd799dc70" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="vienna_rna" version="2.1">
+    <package name="vienna_rna" version="2.1.5">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz</action>
+                <action type="download_by_url">http://www.tbi.univie.ac.at/~ronny/RNA/packages/source/ViennaRNA-2.1.5.tar.gz</action>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="f6efd799dc70" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="perl" version="5.18.1" />
                     </repository>
                 </action>
-                <action type="autoconf">--without-doc</action>
+                <action type="autoconf" />
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
-                    <environment_variable action="set_to" name="ROOT_VIENNA_RNA_DIR">$INSTALL_DIR</environment_variable>
                 </action>
             </actions>
         </install>