Mercurial > repos > iuc > package_vienna_rna_2_1

changeset 5:07f4f60bfd1b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_vienna_rna_2_1 commit e8e971905f5fce11a99d51b1399af45288389d76
author iuc
date Thu, 21 May 2015 22:45:53 -0400
parents bb91a5b178e2
children a0bda0c43c5b
files tool_dependencies.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Feb 12 11:37:02 2015 -0500
+++ b/tool_dependencies.xml	Thu May 21 22:45:53 2015 -0400
@@ -3,21 +3,22 @@
     <package name="perl" version="5.18.1">
         <repository changeset_revision="f6efd799dc70" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="vienna_rna" version="2.1.5">
+    <package name="vienna_rna" version="2.1">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">http://www.tbi.univie.ac.at/~ronny/RNA/packages/source/ViennaRNA-2.1.5.tar.gz</action>
+                <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz</action>
                 <action type="set_environment_for_install">
                     <repository changeset_revision="f6efd799dc70" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="perl" version="5.18.1" />
                     </repository>
                 </action>
-                <action type="autoconf" />
+                <action type="autoconf">--without-doc</action>
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
+                    <environment_variable action="set_to" name="ROOT_VIENNA_RNA_DIR">$INSTALL_DIR</environment_variable>
                 </action>
             </actions>
         </install>