annotate tool_dependencies.xml @ 1:d031f8824405 draft

Uploaded
author iuc
date Fri, 27 Jun 2014 19:36:49 -0400
parents 14fc11f1b590
children c3b5cd4e5ce4
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
2 <tool_dependency>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
3 <package name="zlib" version="1.2.8">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
5 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
6
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
7 <package name="readline" version="6.2">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
8 <repository changeset_revision="246f31787ca1" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
9 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
10
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
11 <package name="bzlib" version="1.0.6">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
12 <repository changeset_revision="2dec91192fc7" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
13 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
14
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
15 <package name="xz" version="5.0.5">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
16 <repository changeset_revision="b6876995a7e8" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
17 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
18
1
d031f8824405 Uploaded
iuc
parents: 0
diff changeset
19 <package name="openssl" version="1.0.1">
0
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
20 <repository changeset_revision="cdd0707dcedd" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
21 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
22
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
23 <package name="sqlite" version="3.8.3">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
24 <repository changeset_revision="e3729818491f" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
25 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
26
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
27 <package name="gdbm" version="1.11">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
28 <repository changeset_revision="7367119a4afc" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
29 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
30
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
31 <package name="ncurses" version="5.9">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
32 <repository changeset_revision="f62fa47b852d" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
33 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
34
1
d031f8824405 Uploaded
iuc
parents: 0
diff changeset
35 <package name="python" version="2.7">
0
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
36 <install version="1.0">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
37 <actions>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
38 <action type="download_by_url">https://www.python.org/ftp/python/2.7.7/Python-2.7.7.tgz</action>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
39
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
40 <action type="set_environment_for_install">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
41 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
42 <package name="zlib" version="1.2.8" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
43 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
44 <repository changeset_revision="246f31787ca1" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
45 <package name="readline" version="6.2" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
46 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
47 <repository changeset_revision="2dec91192fc7" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
48 <package name="bzlib" version="1.0.6" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
49 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
50 <repository changeset_revision="b6876995a7e8" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
51 <package name="xz" version="5.0.5" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
52 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
53 <repository changeset_revision="cdd0707dcedd" name="package_openssl_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
1
d031f8824405 Uploaded
iuc
parents: 0
diff changeset
54 <package name="openssl" version="1.0.1" />
0
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
55 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
56 <repository changeset_revision="e3729818491f" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
57 <package name="sqlite" version="3.8.3" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
58 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
59 <repository changeset_revision="7367119a4afc" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
60 <package name="gdbm" version="1.11" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
61 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
62 <repository changeset_revision="f62fa47b852d" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
63 <package name="ncurses" version="5.9" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
64 </repository>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
65 </action>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
66
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
67 <action type="autoconf" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
68
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
69 <action type="set_environment">
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
70 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
71 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[LD_LIBRARY_PATH]</environment_variable>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
72 <!-- clear PYTHONPATH, otherwise we will get Galaxy's Python 2 libraries in the Python 3 path. -->
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
73 <environment_variable action="set_to" name="PYTHONPATH" />
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
74 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
75 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
76 </action>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
77 </actions>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
78 </install>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
79
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
80 <readme>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
81 The Python programming language version 2.7.
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
82
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
83 http://www.python.org
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
84 </readme>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
85
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
86 </package>
14fc11f1b590 Uploaded
iuc
parents:
diff changeset
87 </tool_dependency>