view tool_dependencies.xml @ 2:c3b5cd4e5ce4 draft

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<?xml version="1.0"?>
<tool_dependency>
  <package name="zlib" version="1.2.8">
    <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="readline" version="6.2">
    <repository changeset_revision="246f31787ca1" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="bzlib" version="1.0.6">
    <repository changeset_revision="2dec91192fc7" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="xz" version="5.0.5">
    <repository changeset_revision="b6876995a7e8" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="openssl" version="1.0.1">
    <repository changeset_revision="cdd0707dcedd" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="sqlite" version="3.8.3">
    <repository changeset_revision="e3729818491f" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="gdbm" version="1.11">
    <repository changeset_revision="7367119a4afc" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="ncurses" version="5.9">
    <repository changeset_revision="f62fa47b852d" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>

  <package name="python" version="2.7">
    <install version="1.0">
      <actions>
        <action type="download_by_url">https://www.python.org/ftp/python/2.7.7/Python-2.7.7.tgz</action>

        <action type="set_environment_for_install">
          <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="zlib" version="1.2.8" />
          </repository>
          <repository changeset_revision="246f31787ca1" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="readline" version="6.2" />
          </repository>
          <repository changeset_revision="2dec91192fc7" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="bzlib" version="1.0.6" />
          </repository>
          <repository changeset_revision="b6876995a7e8" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="xz" version="5.0.5" />
          </repository>
          <repository changeset_revision="cdd0707dcedd" name="package_openssl_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="openssl" version="1.0.1" />
          </repository>
          <repository changeset_revision="e3729818491f" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="sqlite" version="3.8.3" />
          </repository>
          <repository changeset_revision="7367119a4afc" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="gdbm" version="1.11" />
          </repository>
          <repository changeset_revision="f62fa47b852d" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="ncurses" version="5.9" />
          </repository>
        </action>

        <action type="autoconf" />

        <action type="download_file">https://bootstrap.pypa.io/get-pip.py</action>
        <action type="move_file">
            <source>get-pip.py</source>
            <destination>$INSTALL_DIR/bin/pip</destination>
        </action>
        <action type="chmod">
            <file mode="750">$INSTALL_DIR/bin/pip</file>
        </action>

        <action type="set_environment">
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
          <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[LD_LIBRARY_PATH]</environment_variable>
          <!-- clear PYTHONPATH, otherwise we will get Galaxy's Python 2 libraries in the Python 3 path. -->
          <environment_variable action="set_to" name="PYTHONPATH" />
          <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
          <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
        </action>
      </actions>
    </install>

    <readme>
      The Python programming language version 2.7.

      http://www.python.org
    </readme>

  </package>
</tool_dependency>