Mercurial > repos > iuc > minimap2

changeset 9:e738fb9d4a22 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/minimap2 commit ba952bea405513c0d81a33019a4c2fbcdcf8e783
author iuc
date Wed, 08 Nov 2017 12:19:49 -0500
parents 6090793a47e8
children 8cc404188fae
files minimap2.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/minimap2.xml	Wed Nov 08 10:01:55 2017 -0500
+++ b/minimap2.xml	Wed Nov 08 12:19:49 2017 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="minimap2" name="Map with minimap2" version="2.4" profile="17.01">
+<tool id="minimap2" name="Map with minimap2" version="2.4.1" profile="17.01">
     <description>A fast pairwise aligner for genomic and spliced nucleotide sequences</description>
     <requirements>
         <requirement type="package" version="2.4">minimap2</requirement>
@@ -106,6 +106,7 @@
     -O $io_options.output_format
     #if $io_options.output_format == 'CRAM':
         --reference reference.fa
+        --output-fmt-option no_ref
     #end if
     -o '$alignment_output'
 ]]>