Mercurial > repos > iuc > macs2

changeset 25:6ed004769284 draft

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Bug fixes in Cheetah template code.
author hackdna
date Wed, 21 May 2014 15:34:41 -0400
parents a950fb652d18
children 59845dc3331f
files macs2_callpeak.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/macs2_callpeak.xml	Tue May 20 17:08:00 2014 -0400
+++ b/macs2_callpeak.xml	Wed May 21 15:34:41 2014 -0400
@@ -20,12 +20,12 @@
                 -c ${ ' '.join( map( lambda x:'"%s"' % ( x ), $input_control_file ) ) }
             #end if
 
-        #for $ifile in $input_treatment_file[0]:
+        #for $ifile in $input_treatment_file:
             #if $ifile.ext.upper() == 'BAM' and $bampe:
                 --format BAMPE
-            #else:
+            #else
                 --format='$ifile.ext.upper()'
-            #end
+            #end if
         #end for
 
         @effective_genome_size@