Mercurial > repos > iuc > deseq2
changeset 3:1ae1da9a5e66 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit 521ea70d49fee701db4d832823644c8c3050f8f2-dirty
| author | iuc |
|---|---|
| date | Fri, 04 Sep 2015 07:15:37 -0400 |
| parents | 9c706d3721ab |
| children | 070614c08a94 |
| files | deseq2.xml tool_dependencies.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/deseq2.xml Fri Sep 04 07:11:53 2015 -0400 +++ b/deseq2.xml Fri Sep 04 07:15:37 2015 -0400 @@ -2,12 +2,12 @@ <description>Determines differentially expressed features from count tables</description> <requirements> <!-- odering is crucial, otherwise R will override the ENV variables from deseq2 --> - <requirement type="package" version="3.1.0">R</requirement> + <requirement type="package" version="3.2.1">R</requirement> <requirement type="package" version="1.8.1">deseq2</requirement> </requirements> <version_command> <![CDATA[ - echo $(R --version | grep version | grep -v GNU)", DESeq2 version" $(R --vanilla --slave -e "library(DESeq2) && + echo $(R --version | grep version | grep -v GNU)", DESeq2 version" $(R --vanilla --slave -e "library(DESeq2) ; cat(sessionInfo()\$otherPkgs\$DESeq2\$Version)" 2> /dev/null | grep -v -i "WARNING: ") ]]> </version_command>
--- a/tool_dependencies.xml Fri Sep 04 07:11:53 2015 -0400 +++ b/tool_dependencies.xml Fri Sep 04 07:15:37 2015 -0400 @@ -4,6 +4,6 @@ <repository changeset_revision="d973c8e9b29e" name="package_r_3_2_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="deseq2" version="1.8.1"> - <repository changeset_revision="388cc9221c2c" name="package_deseq2_1_8_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="f6cbeb414672" name="package_deseq2_1_8_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>