Mercurial > repos > iuc > alphagenome_sequence_predictor
view test-data/fixture_ism_scanner.json @ 0:7c47594f8a48 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/alphagenome commit 5c5a853db3db3e6590e2e39d9b4b54c5a3b1a708
| author | iuc |
|---|---|
| date | Fri, 20 Mar 2026 20:08:37 +0000 |
| parents | |
| children |
line wrap: on
line source
{ "columns": [ "region", "position", "ref_base", "alt_base", "gene_id", "gene_name", "gene_type", "scorer", "track_name", "ontology_curie", "raw_score", "quantile_score" ], "rows": [ [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000047 polyA plus RNA-seq", "CL:0000047", -1.721732, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000062 total RNA-seq", "CL:0000062", -2.872142, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000084 polyA plus RNA-seq", "CL:0000084", -0.43112, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000084 total RNA-seq", "CL:0000084", -0.323944, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000115 total RNA-seq", "CL:0000115", -1.891316, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000127 total RNA-seq", "CL:0000127", -2.695157, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000134 polyA plus RNA-seq", "CL:0000134", -2.826576, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000137 total RNA-seq", "CL:0000137", -2.560256, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000138 total RNA-seq", "CL:0000138", -2.42312, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000169 total RNA-seq", "CL:0000169", -0.795844, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000182 total RNA-seq", "CL:0000182", -1.609686, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000187 total RNA-seq", "CL:0000187", -3.523364, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000192 total RNA-seq", "CL:0000192", -1.707838, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000221 polyA plus RNA-seq", "CL:0000221", -1.927729, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000222 polyA plus RNA-seq", "CL:0000222", -2.618365, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000223 polyA plus RNA-seq", "CL:0000223", -2.313126, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000223 total RNA-seq", "CL:0000223", -1.154866, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000236 polyA plus RNA-seq", "CL:0000236", -0.299119, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000236 total RNA-seq", "CL:0000236", -0.133313, -0.999941 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000307 total RNA-seq", "CL:0000307", -1.233429, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000312 polyA plus RNA-seq", "CL:0000312", -0.757559, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000346 total RNA-seq", "CL:0000346", -2.658391, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000351 polyA plus RNA-seq", "CL:0000351", -1.029845, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000515 polyA plus RNA-seq", "CL:0000515", -3.428352, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000515 total RNA-seq", "CL:0000515", -3.587678, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000594 total RNA-seq", "CL:0000594", -3.365285, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000623 polyA plus RNA-seq", "CL:0000623", -0.693357, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000623 total RNA-seq", "CL:0000623", -0.57456, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000624 total RNA-seq", "CL:0000624", -0.244827, -0.99998 ], [ "test_region_1", 36201696, "T", "A", "ENSG00000100336.18", "APOL4", "protein_coding", "RNA_SEQ", "CL:0000625 total RNA-seq", "CL:0000625", -0.203565, -0.999972 ] ] }