comparison test-data/fixture_ism_scanner.json @ 0:7c47594f8a48 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/alphagenome commit 5c5a853db3db3e6590e2e39d9b4b54c5a3b1a708
author iuc
date Fri, 20 Mar 2026 20:08:37 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:7c47594f8a48
1 {
2 "columns": [
3 "region",
4 "position",
5 "ref_base",
6 "alt_base",
7 "gene_id",
8 "gene_name",
9 "gene_type",
10 "scorer",
11 "track_name",
12 "ontology_curie",
13 "raw_score",
14 "quantile_score"
15 ],
16 "rows": [
17 [
18 "test_region_1",
19 36201696,
20 "T",
21 "A",
22 "ENSG00000100336.18",
23 "APOL4",
24 "protein_coding",
25 "RNA_SEQ",
26 "CL:0000047 polyA plus RNA-seq",
27 "CL:0000047",
28 -1.721732,
29 -0.99998
30 ],
31 [
32 "test_region_1",
33 36201696,
34 "T",
35 "A",
36 "ENSG00000100336.18",
37 "APOL4",
38 "protein_coding",
39 "RNA_SEQ",
40 "CL:0000062 total RNA-seq",
41 "CL:0000062",
42 -2.872142,
43 -0.99998
44 ],
45 [
46 "test_region_1",
47 36201696,
48 "T",
49 "A",
50 "ENSG00000100336.18",
51 "APOL4",
52 "protein_coding",
53 "RNA_SEQ",
54 "CL:0000084 polyA plus RNA-seq",
55 "CL:0000084",
56 -0.43112,
57 -0.99998
58 ],
59 [
60 "test_region_1",
61 36201696,
62 "T",
63 "A",
64 "ENSG00000100336.18",
65 "APOL4",
66 "protein_coding",
67 "RNA_SEQ",
68 "CL:0000084 total RNA-seq",
69 "CL:0000084",
70 -0.323944,
71 -0.99998
72 ],
73 [
74 "test_region_1",
75 36201696,
76 "T",
77 "A",
78 "ENSG00000100336.18",
79 "APOL4",
80 "protein_coding",
81 "RNA_SEQ",
82 "CL:0000115 total RNA-seq",
83 "CL:0000115",
84 -1.891316,
85 -0.99998
86 ],
87 [
88 "test_region_1",
89 36201696,
90 "T",
91 "A",
92 "ENSG00000100336.18",
93 "APOL4",
94 "protein_coding",
95 "RNA_SEQ",
96 "CL:0000127 total RNA-seq",
97 "CL:0000127",
98 -2.695157,
99 -0.99998
100 ],
101 [
102 "test_region_1",
103 36201696,
104 "T",
105 "A",
106 "ENSG00000100336.18",
107 "APOL4",
108 "protein_coding",
109 "RNA_SEQ",
110 "CL:0000134 polyA plus RNA-seq",
111 "CL:0000134",
112 -2.826576,
113 -0.99998
114 ],
115 [
116 "test_region_1",
117 36201696,
118 "T",
119 "A",
120 "ENSG00000100336.18",
121 "APOL4",
122 "protein_coding",
123 "RNA_SEQ",
124 "CL:0000137 total RNA-seq",
125 "CL:0000137",
126 -2.560256,
127 -0.99998
128 ],
129 [
130 "test_region_1",
131 36201696,
132 "T",
133 "A",
134 "ENSG00000100336.18",
135 "APOL4",
136 "protein_coding",
137 "RNA_SEQ",
138 "CL:0000138 total RNA-seq",
139 "CL:0000138",
140 -2.42312,
141 -0.99998
142 ],
143 [
144 "test_region_1",
145 36201696,
146 "T",
147 "A",
148 "ENSG00000100336.18",
149 "APOL4",
150 "protein_coding",
151 "RNA_SEQ",
152 "CL:0000169 total RNA-seq",
153 "CL:0000169",
154 -0.795844,
155 -0.99998
156 ],
157 [
158 "test_region_1",
159 36201696,
160 "T",
161 "A",
162 "ENSG00000100336.18",
163 "APOL4",
164 "protein_coding",
165 "RNA_SEQ",
166 "CL:0000182 total RNA-seq",
167 "CL:0000182",
168 -1.609686,
169 -0.99998
170 ],
171 [
172 "test_region_1",
173 36201696,
174 "T",
175 "A",
176 "ENSG00000100336.18",
177 "APOL4",
178 "protein_coding",
179 "RNA_SEQ",
180 "CL:0000187 total RNA-seq",
181 "CL:0000187",
182 -3.523364,
183 -0.99998
184 ],
185 [
186 "test_region_1",
187 36201696,
188 "T",
189 "A",
190 "ENSG00000100336.18",
191 "APOL4",
192 "protein_coding",
193 "RNA_SEQ",
194 "CL:0000192 total RNA-seq",
195 "CL:0000192",
196 -1.707838,
197 -0.99998
198 ],
199 [
200 "test_region_1",
201 36201696,
202 "T",
203 "A",
204 "ENSG00000100336.18",
205 "APOL4",
206 "protein_coding",
207 "RNA_SEQ",
208 "CL:0000221 polyA plus RNA-seq",
209 "CL:0000221",
210 -1.927729,
211 -0.99998
212 ],
213 [
214 "test_region_1",
215 36201696,
216 "T",
217 "A",
218 "ENSG00000100336.18",
219 "APOL4",
220 "protein_coding",
221 "RNA_SEQ",
222 "CL:0000222 polyA plus RNA-seq",
223 "CL:0000222",
224 -2.618365,
225 -0.99998
226 ],
227 [
228 "test_region_1",
229 36201696,
230 "T",
231 "A",
232 "ENSG00000100336.18",
233 "APOL4",
234 "protein_coding",
235 "RNA_SEQ",
236 "CL:0000223 polyA plus RNA-seq",
237 "CL:0000223",
238 -2.313126,
239 -0.99998
240 ],
241 [
242 "test_region_1",
243 36201696,
244 "T",
245 "A",
246 "ENSG00000100336.18",
247 "APOL4",
248 "protein_coding",
249 "RNA_SEQ",
250 "CL:0000223 total RNA-seq",
251 "CL:0000223",
252 -1.154866,
253 -0.99998
254 ],
255 [
256 "test_region_1",
257 36201696,
258 "T",
259 "A",
260 "ENSG00000100336.18",
261 "APOL4",
262 "protein_coding",
263 "RNA_SEQ",
264 "CL:0000236 polyA plus RNA-seq",
265 "CL:0000236",
266 -0.299119,
267 -0.99998
268 ],
269 [
270 "test_region_1",
271 36201696,
272 "T",
273 "A",
274 "ENSG00000100336.18",
275 "APOL4",
276 "protein_coding",
277 "RNA_SEQ",
278 "CL:0000236 total RNA-seq",
279 "CL:0000236",
280 -0.133313,
281 -0.999941
282 ],
283 [
284 "test_region_1",
285 36201696,
286 "T",
287 "A",
288 "ENSG00000100336.18",
289 "APOL4",
290 "protein_coding",
291 "RNA_SEQ",
292 "CL:0000307 total RNA-seq",
293 "CL:0000307",
294 -1.233429,
295 -0.99998
296 ],
297 [
298 "test_region_1",
299 36201696,
300 "T",
301 "A",
302 "ENSG00000100336.18",
303 "APOL4",
304 "protein_coding",
305 "RNA_SEQ",
306 "CL:0000312 polyA plus RNA-seq",
307 "CL:0000312",
308 -0.757559,
309 -0.99998
310 ],
311 [
312 "test_region_1",
313 36201696,
314 "T",
315 "A",
316 "ENSG00000100336.18",
317 "APOL4",
318 "protein_coding",
319 "RNA_SEQ",
320 "CL:0000346 total RNA-seq",
321 "CL:0000346",
322 -2.658391,
323 -0.99998
324 ],
325 [
326 "test_region_1",
327 36201696,
328 "T",
329 "A",
330 "ENSG00000100336.18",
331 "APOL4",
332 "protein_coding",
333 "RNA_SEQ",
334 "CL:0000351 polyA plus RNA-seq",
335 "CL:0000351",
336 -1.029845,
337 -0.99998
338 ],
339 [
340 "test_region_1",
341 36201696,
342 "T",
343 "A",
344 "ENSG00000100336.18",
345 "APOL4",
346 "protein_coding",
347 "RNA_SEQ",
348 "CL:0000515 polyA plus RNA-seq",
349 "CL:0000515",
350 -3.428352,
351 -0.99998
352 ],
353 [
354 "test_region_1",
355 36201696,
356 "T",
357 "A",
358 "ENSG00000100336.18",
359 "APOL4",
360 "protein_coding",
361 "RNA_SEQ",
362 "CL:0000515 total RNA-seq",
363 "CL:0000515",
364 -3.587678,
365 -0.99998
366 ],
367 [
368 "test_region_1",
369 36201696,
370 "T",
371 "A",
372 "ENSG00000100336.18",
373 "APOL4",
374 "protein_coding",
375 "RNA_SEQ",
376 "CL:0000594 total RNA-seq",
377 "CL:0000594",
378 -3.365285,
379 -0.99998
380 ],
381 [
382 "test_region_1",
383 36201696,
384 "T",
385 "A",
386 "ENSG00000100336.18",
387 "APOL4",
388 "protein_coding",
389 "RNA_SEQ",
390 "CL:0000623 polyA plus RNA-seq",
391 "CL:0000623",
392 -0.693357,
393 -0.99998
394 ],
395 [
396 "test_region_1",
397 36201696,
398 "T",
399 "A",
400 "ENSG00000100336.18",
401 "APOL4",
402 "protein_coding",
403 "RNA_SEQ",
404 "CL:0000623 total RNA-seq",
405 "CL:0000623",
406 -0.57456,
407 -0.99998
408 ],
409 [
410 "test_region_1",
411 36201696,
412 "T",
413 "A",
414 "ENSG00000100336.18",
415 "APOL4",
416 "protein_coding",
417 "RNA_SEQ",
418 "CL:0000624 total RNA-seq",
419 "CL:0000624",
420 -0.244827,
421 -0.99998
422 ],
423 [
424 "test_region_1",
425 36201696,
426 "T",
427 "A",
428 "ENSG00000100336.18",
429 "APOL4",
430 "protein_coding",
431 "RNA_SEQ",
432 "CL:0000625 total RNA-seq",
433 "CL:0000625",
434 -0.203565,
435 -0.999972
436 ]
437 ]
438 }