Mercurial > repos > greg > drmi
changeset 8:a0d57df923d2 draft
Uploaded
| author | greg |
|---|---|
| date | Fri, 03 Nov 2017 13:33:58 -0400 |
| parents | 2b6708bc9391 |
| children | cf847e9f1a3a |
| files | dmri.py |
| diffstat | 1 files changed, 9 insertions(+), 9 deletions(-) [+] |
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--- a/dmri.py Fri Nov 03 13:30:34 2017 -0400 +++ b/dmri.py Fri Nov 03 13:33:58 2017 -0400 @@ -25,16 +25,16 @@ shutil.move(source_entry, destination_directory) if remove_source_dir: os.rmdir(source_directory) - -input_dir = 'input_dir' -# Get input data. -fetch_sherbrooke_3shell() -# MNove inputs to working directory. source_dir = os.path.abspath(os.path.join('home', 'greg', '.dipy', 'sherbrooke_3shell')) -move_directory_files(source_dir, input_dir) -fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') -fbval = os.path.join(input_dir, 'HARDI193.bval') -fbvec = os.path.join(input_dir, 'HARDI193.bvec') +dest_dir = 'input_dir' +if not os.path.exists(source_dir): + # Get input data. + fetch_sherbrooke_3shell() +# Move inputs to working directory. +move_directory_files(source_dir, dest_dir, copy=True) +fdwi = os.path.join(dest_dir, 'HARDI193.nii.gz') +fbval = os.path.join(dest_dir, 'HARDI193.bval') +fbvec = os.path.join(dest_dir, 'HARDI193.bvec') # Load the dMRI datasets. img = nibabel.load(fdwi) data = img.get_data()