Mercurial > repos > george-weingart > graphlan_import

changeset 16:8c34d0d94c44 draft

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Uploaded
author george-weingart
date Thu, 04 Sep 2014 15:22:36 -0400
parents e743b0890ce2
children 33a3a37c7872
files export2graphlan.xml
diffstat 1 files changed, 6 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/export2graphlan.xml	Thu Sep 04 14:47:30 2014 -0400
+++ b/export2graphlan.xml	Thu Sep 04 15:22:36 2014 -0400
@@ -10,7 +10,11 @@
 	--annotations $export_annotations 
 	--external_annotations $export_external_annotations
 	--background_levels  $background_levels 
-	--background_clades  $background_clades
+	#if $background_clades  != " ":
+               	--background_clades  $background_clades
+	#end if
+
+
 	--skip_rows 1,2 
    </command>
    
@@ -46,7 +50,7 @@
 
  * **Output of LEfSe**: This file is the result of LEfSe execute on the *Result of MetaPhlAn or HUMAnN analysis* file. This file allow GraPhlAn to highlight for you the found biomarkers.
 
-Input parameters9999
+Input parameters1234
 --------------------
  
     --annotations ANNOTATIONS