# HG changeset patch
# User george-weingart
# Date 1409858556 14400
# Node ID 8c34d0d94c446ce86d883b2e648f7b48d8f7f88f
# Parent  e743b0890ce2835b1e73f5156bd63ae1e5cb53d4
Uploaded

diff -r e743b0890ce2 -r 8c34d0d94c44 export2graphlan.xml
--- a/export2graphlan.xml	Thu Sep 04 14:47:30 2014 -0400
+++ b/export2graphlan.xml	Thu Sep 04 15:22:36 2014 -0400
@@ -10,7 +10,11 @@
 	--annotations $export_annotations 
 	--external_annotations $export_external_annotations
 	--background_levels  $background_levels 
-	--background_clades  $background_clades
+	#if $background_clades  != " ":
+               	--background_clades  $background_clades
+	#end if
+
+
 	--skip_rows 1,2 
    </command>
    
@@ -46,7 +50,7 @@
 
  * **Output of LEfSe**: This file is the result of LEfSe execute on the *Result of MetaPhlAn or HUMAnN analysis* file. This file allow GraPhlAn to highlight for you the found biomarkers.
 
-Input parameters9999
+Input parameters1234
 --------------------
  
     --annotations ANNOTATIONS