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Fixes. MuTect now works
author geert-vandeweyer
date Mon, 17 Feb 2014 11:54:09 -0500
parents 9cdd41f22d81
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<?xml version="1.0"?>
<tool_dependency>
    <set_environment version="1.0">
        <environment_variable action="set_to" name="MUTECT_PATH">/please set the path to your GATK2 dir in the corresponding env.sh file/</environment_variable>
    </set_environment>
   <package name="samtools" version="0.1.18">
        <repository changeset_revision="c0f72bdba484" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
</tool_dependency>