Mercurial > repos > geert-vandeweyer > mutect_wrapper

changeset 16:52efdea30175 draft default tip

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Fixes. MuTect now works
author geert-vandeweyer
date Mon, 17 Feb 2014 11:54:09 -0500
parents 37a8219b62de
children
files mutect_wrapper.xml
diffstat 1 files changed, 3 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/mutect_wrapper.xml	Mon Feb 17 11:53:56 2014 -0500
+++ b/mutect_wrapper.xml	Mon Feb 17 11:54:09 2014 -0500
@@ -5,7 +5,9 @@
   </macros>
 
   <command interpreter="python">
-    mutect_wrapper.py -j "@JAR_PATH@" -T MuTect 
+    mutect_wrapper.py -j '@JAR_PATH@'
+	-T MuTect 
+	
 	#if $genomeSource.refGenomeSource == "history":
  	--ref "${genomeSource.ownFile}"
 	#else: