Mercurial > repos > geert-vandeweyer > mutect_wrapper

annotate mutect_macros.xml @ 4:e774395351f5 draft

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author geert-vandeweyer
date Thu, 13 Feb 2014 09:27:19 -0500
parents 3890e5bd1121
children b16b3514b628
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1 <macros>
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2 <xml name="requirements">
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3 <requirements>
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4 <requirement type="package">mutect</requirement>
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5 <requirement type="package" version="0.1.18">samtools</requirement>
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6 <requirement type="set_environment">MUTECT_PATH</requirement>
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7 </requirements>
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8 </xml>
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9 <token name="@JAR_PATH@">
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10 java -jar "\$MUTECT_PATH/muTect.jar"
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11 </token>
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12 </macros>
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