Mercurial > repos > geert-vandeweyer > mutect_wrapper

view mutect_macros.xml @ 2:3890e5bd1121 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author geert-vandeweyer
date Thu, 13 Feb 2014 09:27:06 -0500
parents
children b16b3514b628
line wrap: on
line source

<macros>
  <xml name="requirements">
    <requirements>
      <requirement type="package">mutect</requirement>
      <requirement type="package" version="0.1.18">samtools</requirement>
      <requirement type="set_environment">MUTECT_PATH</requirement>
    </requirements>
  </xml>
  <token name="@JAR_PATH@">
    java -jar "\$MUTECT_PATH/muTect.jar"
  </token>
</macros>